| General information about the entry |
| Entry name | GLYCOSYL_HYDROL_F6_2 |
| Accession number | PS00656 |
| Entry type | PATTERN |
| Date | JUN-1992 (CREATED); NOV-1997 (DATA UPDATE); FEB-2010 (INFO UPDATE).
|
| PROSITE Documentation | PDOC00563 |
| Associated ProRule | PRU10057 |
| Name and characterization of the entry |
| Description | Glycosyl hydrolases family 6 signature 2.
|
| Pattern | [LIVMYA]-[LIVA]-[LIVT]-[LIV]-E-P-D-[SAL]-[LI]-[PSAG].
|
| Numerical results |
- UniProtKB/Swiss-Prot release number: 57.15, total number of sequence entries in that release: 515203.
- Total number of hits in UniProtKB/Swiss-Prot: 12 hits in 12 different sequences
- Number of hits on proteins that are known to belong to the set under consideration: 11 hits in 11 different sequences
- Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
- Number of false hits (on unrelated proteins): 1 hits in 1 different sequences
- Number of known missed hits: 0
- Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
- Precision (true hits / (true hits + false positives)): 91.67 %
- Recall (true hits / (true hits + false negatives)): 100.00 %
|
| Comments |
|---|
- Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
- Maximum known number of repetitions of the pattern in a single protein: 1
- `Interesting' site in the pattern: 7,active_site
- VERSION: 1
|
| Cross-references |
| UniProtKB/Swiss-Prot | True positive hits:GUN1_STRHA (P33682), GUN1_STRSS (P13933), GUN2_THEFU (P26222),
GUN6_HUMIN (Q7SIG5), GUNA_CELFI (P07984), GUNA_MICBI (P26414),
GUNB_FUSOX (P46236), GUX2_TRIRE (P07987), GUX3_AGABI (P49075),
GUX6_HUMIN (Q9C1S9), GUXA_CELFI (P50401) False positive hits (sequences which do not belong to the set under consideration):YL001_YEAST (Q07895) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
Retrieve the sequence logo from the alignment
|
PDB [Detailed view] | 1BVW; 1CB2; 1DYS; 1GZ1; 1HGW; 1OC5; 1OC6; 1OC7; 1OCB; 1OCJ; 1OCN; 1QJW; 1QK0; 1QK2; 1TML; 2BOD; 2BOE; 2BOF; 2BOG; 2BVW; 3CBH; |
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