PROSITE entry PS00646

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PURL: https://purl.expasy.org/prosite/signature/PS00646

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General information about the entry

Entry name [info]	RIBOSOMAL_S13_1
Accession [info]	PS00646
Entry type [info]	PATTERN
Date [info]	01-JUN-1992 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00556

Name and characterization of the entry

Description [info]	Ribosomal protein S13 signature.
Pattern [info]	[KRQSEAT]-[GS]-x-R-H-x(2)-[GSNHKLCD]-x(2)-[LIVMCT]-[RNH]-G-Q.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.

Total number of hits	841 in 841 different sequences
Number of true positive hits	833 in 833 different sequences
Number of 'unknown' hits	0
Number of false positive hits	8 in 8 different sequences
Number of false negative sequences	20
Number of 'partial' sequences	1

Precision (true positives / (true positives + false positives))	99.05 %
Recall (true positives / (true positives + false negatives))	97.66 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	833 sequences RR13_ARATH (P42732), RR13_CYACA (Q9TLV0), RR13_CYAM1 (P59758), » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	20 sequences RS13_BEII9 (B2IF93), RS13_CHLP8 (B3QR95), RS13_CHLPB (B3EP37), » more
UniProtKB/Swiss-Prot 'Partial' sequences	1 sequence RS13_PARDE (P72180)
UniProtKB/Swiss-Prot False positive sequences	8 sequences FEH1_CAEEL (Q9BKZ9), MNMC_BURA4 (B1YQ54), MNMC_BURCH (A0K2U3), » more
PDB [Detailed view]	1426 PDB 1FJG; 1HNW; 1HNX; 1HNZ; 1HR0; 1I94; 1I95; 1I96; 1I97; 1IBK; 1IBL; 1IBM; » more