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PROSITE entry PS00634


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS00634
Entry name [info] RIBOSOMAL_L30
Accession [info] PS00634
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00551

Name and characterization of the entry

Description [info] Ribosomal protein L30 signature.
Pattern [info] 
[IVTAS]-[LIVM]-x(2)-[LF]-x-[LI]-x-[KRHQEG]-x(2)-[STNQH]-x-[IVTR]-x(10)-
[LMSN]-[LIV]-x(2)-[LIVA]-x(2)-[LMFY]-[IVT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 330 in 330 different sequences
Number of true positive hits 327 in 327 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 435
Number of 'partial' sequences 5
Precision (true positives / (true positives + false positives)) 99.09 %
Recall (true positives / (true positives + false negatives)) 42.91 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 327 sequences 

RL30_ACTP2  (A3N375), RL30_ACTP7  (B3GZ29), RL30_ACTPJ  (B0BSU9),
» more

UniProtKB/Swiss-Prot
False negative sequences		 435 sequences 

RL30_ACET2  (A3DJJ0), RL30_ACHLI  (A9NEF1), RL30_ACIAD  (Q6F7T0),
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 5 sequences 

RL30_BREDI  (Q9R4P8), RL30_BREVE  (Q9R4P3), RL30_ECTME  (Q9R5V9),
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

S38A4_HUMAN (Q969I6), S38A4_PONAB (Q5RE87), YAKA_DICDI  (Q54QV3)


				
	

	

		PDB
[Detailed view]		
		
			1274 PDB
			


			1BXY; 1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1ML5; 
			
			

			» more