PROSITE entry PS00600

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PURL: https://purl.expasy.org/prosite/signature/PS00600

Direct ScanProsite submission

General information about the entry

Entry name [info]	AA_TRANSFER_CLASS_3
Accession [info]	PS00600
Entry type [info]	PATTERN
Date [info]	01-DEC-1991 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00519

Name and characterization of the entry

Description [info]	Aminotransferases class-III pyridoxal-phosphate attachment site.
Pattern [info]	[LIVMFYWCS]-[LIVMFYWCAH]-x-D-[ED]-[IVA]-x(2,3)-[GAT]-[LIVMFAGCYN]-x(0,1)- [RSACLIH]-x-[GSADEHRM]-x(10,16)-[DH]-[LIVMFCAG]-[LIVMFYSTAR]-x(2)-[GSA]- K-x(2,3)-[GSTADNV]-[GSAC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.

Total number of hits	1'049 in 1'049 different sequences
Number of true positive hits	1'049 in 1'049 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	39
Number of 'partial' sequences	2

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	96.42 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Site [info]	pyridoxal_phosphate at position 19
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	1049 sequences 2AAAT_PSEPK (Q88FI7), ACLR_ACHOB (Q7M181), AGT21_ARATH (Q940M2), » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	39 sequences BARAC_PYRHO (O57878), BFAT_VARPD (H8WR05), BIOA_NITV2 (Q728P4), » more
UniProtKB/Swiss-Prot 'Partial' sequences	2 sequences ARGD_BACAM (Q9ZJ10), BIOA_CITFR (P13071)
PDB [Detailed view]	192 PDB 1D7R; 1D7S; 1D7U; 1D7V; 1DGD; 1DGE; 1DKA; 1DTY; 1GBN; 1M0N; 1M0O; 1M0P; » more