PROSITE entry PS00578
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PURL: https://purl.expasy.org/prosite/signature/PS00578
Direct ScanProsite submission
General information about the entry
Entry name [info] | RIBOSOMAL_S6E |
Accession [info] | PS00578 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00500 |
Name and characterization of the entry
Description [info] | Ribosomal protein S6e signature. |
Pattern [info] |
[LIVM]-[STAMR]-G-G-x-[DG]-x(2)-G-x-[PV]-M. |
Numerical results [info]
Total number of hits | 80 in 80 different sequences |
Number of true positive hits | 77 in 77 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 17 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 96.25 % |
Recall (true positives / (true positives + false negatives)) | 81.91 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
77 sequences
RS62_ARATH (P51430), RS6A_CANAL (A0A1D8PL99), RS6A_SCHPO (P05752),» more
|
UniProtKB/Swiss-Prot False negative sequences |
17 sequences
RS61_ARATH (O48549), RS6E_METB6 (A7IAP8), RS6E_METHJ (Q2FU50),» more |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
BCL9L_HUMAN (Q86UU0), BCL9L_MOUSE (Q67FY2), Y886_HAEIN (P44069) |
PDB [Detailed view] |
441 PDB
3J16; 3J6X; 3J6Y; 3J77; 3J78; 3J80; 3J81; 3JAG; 3JAH; 3JAI; 3JAM; 3JAP; » more |