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PROSITE entry PS00578


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PURL: https://purl.expasy.org/prosite/signature/PS00578

Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_S6E
Accession [info] PS00578
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00500

Name and characterization of the entry

Description [info] Ribosomal protein S6e signature.
Pattern [info]
[LIVM]-[STAMR]-G-G-x-[DG]-x(2)-G-x-[PV]-M.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 80 in 80 different sequences
Number of true positive hits 77 in 77 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.25 %
Recall (true positives / (true positives + false negatives)) 81.91 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
77 sequences

RS62_ARATH  (P51430), RS6A_CANAL  (A0A1D8PL99), RS6A_SCHPO  (P05752), 
» more

UniProtKB/Swiss-Prot
False negative sequences
17 sequences

RS61_ARATH  (O48549), RS6E_METB6  (A7IAP8), RS6E_METHJ  (Q2FU50), 
» more

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

BCL9L_HUMAN (Q86UU0), BCL9L_MOUSE (Q67FY2), Y886_HAEIN  (P44069)

		
PDB
[Detailed view]
441 PDB

3J16; 3J6X; 3J6Y; 3J77; 3J78; 3J80; 3J81; 3JAG; 3JAH; 3JAI; 3JAM; 3JAP;
» more