PROSITE entry PS00475

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General information about the entry

PURL [info]	https://purl.expasy.org/prosite/signature/PS00475
Entry name [info]	RIBOSOMAL_L15
Accession [info]	PS00475
Entry type [info]	PATTERN
Date [info]	01-MAY-1991 CREATED; 01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00386

Name and characterization of the entry

Description [info]	Ribosomal protein L15 signature.
Pattern [info]	[KR]-[LIVM](2)-[GASL]-x-[GT]-x-[LIVMA]-x(2,5)-[LIVMF]-x-[LIVMF]-x(3,4)- [LIVMFCA]-[ST]-x(2)-A-x(3)-[LIVM]-x(3)-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.

Total number of hits	691 in 691 different sequences
Number of true positive hits	678 in 678 different sequences
Number of 'unknown' hits	0
Number of false positive hits	13 in 13 different sequences
Number of false negative sequences	147
Number of 'partial' sequences	3

Precision (true positives / (true positives + false positives))	98.12 %
Recall (true positives / (true positives + false negatives))	82.18 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	678 sequences R27A1_ENTH1 (Q9BI06), R27A2_ARATH (Q9LR33), R27A2_ENTH1 (Q9BH80), » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	147 sequences R27A1_ARATH (Q9LPV3), RL15_ACET2 (A3DJJ1), RL15_ACIET (B9MBV6), » more
UniProtKB/Swiss-Prot 'Partial' sequences	3 sequences RL15_STRLI (P49975), RL27A_PIG (Q29333), RL28_CANAX (P47831)
UniProtKB/Swiss-Prot False positive sequences	13 sequences RL18E_AERPE (Q9YB51), RL18E_ARCFU (O29138), RL18E_HALMA (P12733), » more
PDB [Detailed view]	1368 PDB 1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1ML5; 1N8R; » more