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PROSITE entry PS00395


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PURL: https://purl.expasy.org/prosite/signature/PS00395

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General information about the entry

Entry name [info] ALANINE_RACEMASE
Accession [info] PS00395
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-FEB-2002 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00332

Name and characterization of the entry

Description [info] Alanine racemase pyridoxal-phosphate attachment site.
Pattern [info] 
[SACVLG]-[AIPTV]-x(0,1)-K-[ADGS]-[DEN]-[GA]-Y-G-[HACILN]-[GD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 331 in 331 different sequences
Number of true positive hits 331 in 331 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 44
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 88.27 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 331 sequences 

ALR1_AGRFC  (P58736), ALR1_BACSU  (P10725), ALR1_CALS4  (Q8RAK6),
» more

UniProtKB/Swiss-Prot
False negative sequences		 44 sequences 

ALR2_STAA8  (Q9EZ08), ALR2_STAAC  (Q5HG21), ALR2_STAAM  (P63482),
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

ALR_PISSA   (Q9F9L1), ALR_PSEFL   (P33162)


				
	

	

		PDB
[Detailed view]		
		
			52 PDB
			


			1BD0; 1EPV; 1FTX; 1L6F; 1L6G; 1NIU; 1RCQ; 1SFT; 1XFC; 1XQK; 1XQL; 2RJG; 
			
			

			» more