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PROSITE entry PS00388


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS00388
Entry name [info] PROTEASOME_ALPHA_1
Accession [info] PS00388
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-JUL-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00326

Name and characterization of the entry

Description [info] Proteasome alpha-type subunits signature.
Pattern [info] 
[FYNAGS]-x(4)-[STNLV]-x-[FYW]-S-[PDS]-x(0,1)-G-[RKHDS]-x(2)-Q-[LIVA]-
[DENR]-[YH]-[GSAD]-x(2)-[GSAG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 174 in 174 different sequences
Number of true positive hits 174 in 174 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 64
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 73.11 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 174 sequences 

PSA1A_ARATH (P34066), PSA1B_ARATH (O23712), PSA1_BOVIN  (Q3T0X5),
» more

UniProtKB/Swiss-Prot
False negative sequences		 64 sequences 

PSA1_RHOER  (Q53080), PSA2_RHOER  (Q53084), PSA3_ENCCU  (Q8SRU7),
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

PSMA_HALDO  (P84799)


				
	

	

		PDB
[Detailed view]		
		
			506 PDB
			


			1FNT; 1G0U; 1G65; 1IRU; 1J2P; 1JD2; 1PMA; 1RYP; 1YA7; 1YAR; 1YAU; 1Z7Q; 
			
			

			» more