PROSITE entry PS00368
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PURL: https://purl.expasy.org/prosite/signature/PS00368
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General information about the entry
| Entry name [info] | RIBORED_SMALL |
| Accession [info] | PS00368 |
| Entry type [info] | PATTERN |
| Date [info] |
01-NOV-1990 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00317 |
| Associated ProRule [info] | PRU10014 |
Name and characterization of the entry
| Description [info] | Ribonucleotide reductase small subunit signature. |
| Pattern [info] |
[IVMSEQ]-E-x(1,2)-[LIVTA]-[HY]-[GSA]-x-[STAVM]-Y-x(2)-[LIVMQ]-x(3)- [LIVFY]-[IVFYCSA]. |
Numerical results [info]
| Total number of hits | 86 in 86 different sequences |
| Number of true positive hits | 85 in 85 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 1 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 98.84 % |
| Recall (true positives / (true positives + false negatives)) | 89.47 % |
Comments [info]
| Taxonomic range [info] | Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Site [info] | iron at position 2 |
| Site [info] | iron at position 5 |
| Site [info] | active_site at position 9 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
85 sequences
BNRDF_BPSPB (O64174), RI2BC_ARATH (P0DKH2), RI2BL_ARATH (P0DKH3),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
RIR2_CHLMU (Q9PL92), RIR2_CHLPN (Q9Z6S4), RIR2_CHLTR (O84835),» more |
| UniProtKB/Swiss-Prot False positive sequences |
1 sequence
GCYB_PLABA (A0A509APX1) |
| PDB [Detailed view] |
61 PDB
1AV8; 1H0N; 1H0O; 1JK0; 1JPR; 1JQC; 1MRR; 1MXR; 1PFR; 1PIM; 1PIU; 1PIY; » more |