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PROSITE entry PS00350


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PURL: https://purl.expasy.org/prosite/signature/PS00350

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General information about the entry

Entry name [info] MADS_BOX_1
Accession [info] PS00350
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00302

Name and characterization of the entry

Description [info] MADS-box domain signature.
Pattern [info] 
[RGS]-x-[RKS]-x(5)-[IL]-x-[DNGSK]-x(3)-[KR]-x(2)-T-[FY]-x-[RK](3)-x(2)-
[LIVM]-x-[KE]-K-[AT]-x-[EQ]-[LIVM]-[STA]-x-L-x(4)-[LIVM]-x-[LIVM]-
[LIVMT]-[LIVM]-x(6)-[LIVMFC]-x(2)-[FYLS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 169 in 169 different sequences
Number of true positive hits 169 in 169 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 37
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.04 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 169 sequences 

1AP1_BRAOT  (Q96355), 2AP1_BRAOT  (Q96356), 3AP1_BRAOL  (Q39371),
» more

UniProtKB/Swiss-Prot
False negative sequences		 37 sequences 

AG103_ARATH (Q9LSB2), AGL23_ARATH (O80807), AGL27_ARATH (Q9AT76),
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

AP32_ASAEU  (Q9LLA7)


				
	

	

		PDB
[Detailed view]		
		
			20 PDB
			


			1C7U; 1EGW; 1HBX; 1K6O; 1MNM; 1N6J; 1SRS; 1TQE; 3KOV; 3MU6; 3P57; 5F28; 
			
			

			» more