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PROSITE entry PS00344


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PURL: https://purl.expasy.org/prosite/signature/PS00344

Direct ScanProsite submission
General information about the entry

Entry name [info] GATA_ZN_FINGER_1
Accession [info] PS00344
Entry type [info] PATTERN
Date [info] 01-NOV-1990 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00300

Name and characterization of the entry

Description [info] GATA-type zinc finger domain.
Pattern [info]
C-x-[DNEHQSTI]-C-x(4,6)-[ST]-x(2)-[WM]-[HR]-[RKENAMSLPGQT]-x(3,4)-[GNEP]-
x(3,6)-C-[NES]-[ASNR]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 188 in 139 different sequences
Number of true positive hits 188 in 139 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 40
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.46 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Site [info] zinc at position 1
Site [info] zinc at position 4
Site [info] zinc at position 14
Site [info] zinc at position 17
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
139 sequences

AMS2_SCHPO  (Q9URT4), AREA_ASPNG  (O13412), AREA_ASPOR  (O13415), 
» more

UniProtKB/Swiss-Prot
False negative sequences
40 sequences

ASH1_CANAL  (Q5A5Q6), BRG1_CANAL  (Q59LY1), EGL18_CAEEL (G5EGF4), 
» more

PDB
[Detailed view]
28 PDB

1GAT; 1GAU; 1GNF; 1Y0J; 2GAT; 2L6Y; 2L6Z; 2M9W; 2VUS; 2VUT; 2VUU; 3DFV;
» more