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PROSITE entry PS00300


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PURL: https://purl.expasy.org/prosite/signature/PS00300

Direct ScanProsite submission
General information about the entry

Entry name [info] SRP54
Accession [info] PS00300
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00272

Name and characterization of the entry

Description [info] SRP54-type proteins GTP-binding domain signature.
Pattern [info] 
P-[LIVM]-x-[FYL]-[LIVMAT]-[GS]-{Q}-[GS]-[EQ]-x-{K}-x(2)-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 140 in 140 different sequences
Number of true positive hits 118 in 118 different sequences
Number of 'unknown' hits 0
Number of false positive hits 22 in 22 different sequences
Number of false negative sequences 45
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 84.29 %
Recall (true positives / (true positives + false negatives)) 72.39 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 118 sequences 

CFTSY_ARATH (O80842), FTSY_AGRFC  (A9CHH2), FTSY_AQUAE  (O67066),
» more

UniProtKB/Swiss-Prot
False negative sequences		 45 sequences 

FLHF_AQUAE  (O67266), FLHF_BACSU  (Q01960), FLHF_BORBU  (Q44758),
» more

UniProtKB/Swiss-Prot
False positive sequences		 22 sequences 

CRN1_PHYIN  (Q8H6Z6), CSPG2_MOUSE (Q62059), CSPG2_RAT   (Q9ERB4),
» more

PDB
[Detailed view]		 75 PDB

1FFH; 1FTS; 1JPJ; 1JPN; 1LS1; 1NG1; 1O87; 1OKK; 1RJ9; 1RY1; 2C03; 2C04;
» more