PROSITE entry PS00211

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission

General information about the entry

PURL [info]	https://purl.expasy.org/prosite/signature/PS00211
Entry name [info]	ABC_TRANSPORTER_1
Accession [info]	PS00211
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00185

Name and characterization of the entry

Description [info]	ABC transporters family signature.
Pattern [info]	[LIVMFYC]-[SA]-[SAPGLVFYKQH]-G-[DENQMW]-[KRQASPCLIMFW]-[KRNQSTAVM]- [KRACLVM]-[LIVMFYPAN]-{PHY}-[LIVMFW]-[SAGCLIVP]-{FYWHP}-{KRHP}- [LIVMFYWSTA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.

Total number of hits	4'428 in 4'064 different sequences
Number of true positive hits	4'197 in 3'834 different sequences
Number of 'unknown' hits	0
Number of false positive hits	231 in 230 different sequences
Number of false negative sequences	335
Number of 'partial' sequences	5

Precision (true positives / (true positives + false positives))	94.78 %
Recall (true positives / (true positives + false negatives))	92.61 %

Comments [info]

Taxonomic range [info]	Archaea, Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info]	2
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	3834 sequences AAPP_RHIJ3 (Q52815), AARD_PROST (Q52402), AAXC_CHLPN (Q9Z6M8), » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	335 sequences AB11I_ARATH (Q8LEF6), AB19I_ARATH (Q3EDJ0), AB1I_ARATH (Q9C8T1), » more
UniProtKB/Swiss-Prot 'Partial' sequences	5 sequences MALK_PHOLU (P41124), NODI_RHILT (P24143), UVRA_PARDE (P29927), » more
UniProtKB/Swiss-Prot False positive sequences	230 sequences AATK_SULTO (P62021), ACC1_ARATH (Q38970), ADNP_HUMAN (Q9H2P0), » more
PDB [Detailed view]	668 PDB 1B0U; 1F3O; 1G29; 1G6H; 1G9X; 1GAJ; 1JJ7; 1L2T; 1L7V; 1MT0; 1MV5; 1OXS; » more