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PROSITE entry PS00116


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PURL: https://purl.expasy.org/prosite/signature/PS00116

Direct ScanProsite submission
General information about the entry

Entry name [info] DNA_POLYMERASE_B
Accession [info] PS00116
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00107

Name and characterization of the entry

Description [info] DNA polymerase family B signature.
Pattern [info]
[YA]-[GLIVMSTAC]-D-T-D-[SG]-[LIVMFTC]-{LA}-[LIVMSTAC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 165 in 165 different sequences
Number of true positive hits 148 in 148 different sequences
Number of 'unknown' hits 2 in 2 different sequences
Number of false positive hits 15 in 15 different sequences
Number of false negative sequences 26
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 90.80 %
Recall (true positives / (true positives + false negatives)) 85.06 %

Comments [info]

Taxonomic range [info] Archaea, Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
148 sequences

DPO1_KLULA  (P09804), DPO2_ECOLI  (P21189), DPO2_KLULA  (P05468), 
» more

UniProtKB/Swiss-Prot
False negative sequences
26 sequences

DPOE_ASPFU  (Q4WXH8), DPOE_CANGA  (Q6FNY7), DPOE_CRYNB  (P0CN27), 
» more

UniProtKB/Swiss-Prot
'Unknown' sequences
2 sequences

LTP_VZVD(P09278), LTP_VZVO(Q4JQX9)

		
UniProtKB/Swiss-Prot
False positive sequences
15 sequences

ACDG1_METTE (Q50539), ACDG2_METTE (Q9C4Z0), ACDG_METAC  (Q8TH44), 
» more

PDB
[Detailed view]
278 PDB

1CLQ; 1D5A; 1IG9; 1IH7; 1Q8I; 1Q9X; 1Q9Y; 1QHT; 1QQC; 1S5J; 1TGO; 1WAF;
» more