PROSITE entry PS00095
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PURL: https://purl.expasy.org/prosite/signature/PS00095
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General information about the entry
Entry name [info] | C5_MTASE_2 |
Accession [info] | PS00095 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-APR-2003 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00089 |
Name and characterization of the entry
Description [info] | C-5 cytosine-specific DNA methylases C-terminal signature. |
Pattern [info] |
[RKQGTF]-x(2)-G-N-[SA]-[LIVF]-x-[VIP]-x-[LVMT]-x(3)-[LIVM]-x(3)-[LIVM]. |
Numerical results [info]
Total number of hits | 78 in 78 different sequences |
Number of true positive hits | 68 in 68 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 10 in 10 different sequences |
Number of false negative sequences | 25 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 87.18 % |
Recall (true positives / (true positives + false negatives)) | 73.12 % |
Comments [info]
Taxonomic range [info] | Archaea, Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
68 sequences
CMT2_ORYSJ (Q5KQL9), DCM_ECO57 (P0AEE0), DCM_ECOLI (P0AED9),» more
|
UniProtKB/Swiss-Prot False negative sequences |
25 sequences
CMT1_ORYSJ (A0A0P0VUY4), CMT3_ORYSJ (C0SQ89), DNM3A_CHICK (Q4W5Z4),» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
MTG1_HERAU (P25267) |
UniProtKB/Swiss-Prot False positive sequences |
10 sequences
ATPB_MYCGI (A4T8K2), ATPB_MYCLE (P45823), CDAA_BACSU (Q45589),» more |
PDB [Detailed view] |
62 PDB
10MH; 1DCT; 1FJX; 1G55; 1HMY; 1M0E; 1MHT; 1SKM; 1SVU; 2C7O; 2C7P; 2C7Q; » more |