PROSITE entry PS00090
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS00090
Direct ScanProsite submission
General information about the entry
Entry name [info] | NITROGENASE_1_2 |
Accession [info] | PS00090 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-1992 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00085 |
Name and characterization of the entry
Description [info] | Nitrogenases component 1 alpha and beta subunits signature 2. |
Pattern [info] |
[STANQ]-[ET]-C-x(5)-G-D-[DN]-[LIVMT]-x-[STAGR]-[LIVMFYST]. |
Numerical results [info]
Total number of hits | 75 in 75 different sequences |
Number of true positive hits | 70 in 70 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 5 in 5 different sequences |
Number of false negative sequences | 13 |
Number of 'partial' sequences | 4 |
Precision (true positives / (true positives + false positives)) | 93.33 % |
Recall (true positives / (true positives + false negatives)) | 84.34 % |
Comments [info]
Taxonomic range [info] | Archaea, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | iron_sulfur(?) at position 3 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
70 sequences
ANFD_AZOVI (P16266), ANFD_HELGE (O68955), ANFD_RHOCA (Q07933),» more
|
UniProtKB/Swiss-Prot False negative sequences |
13 sequences
ANFD_RUMHU (Q46082), NIFK_FRAAL (Q57118), NIFK_METBA (P51754),» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
NIFD_ANASL (P33177), NIFD_METIV (P51605), NIFD_RHILT (P00465),» more |
UniProtKB/Swiss-Prot False positive sequences |
5 sequences
E4PD_YERE8 (A1JPR1), E4PD_YERPA (Q1CB62), E4PD_YERPE (Q7CGS4),» more |
PDB [Detailed view] |
87 PDB
1FP4; 1G20; 1G21; 1H1L; 1L5H; 1M1N; 1M1Y; 1M34; 1MIO; 1N2C; 1QGU; 1QH1; » more |