PROSITE entry PS00089
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PURL: https://purl.expasy.org/prosite/signature/PS00089
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General information about the entry
| Entry name [info] | RIBORED_LARGE |
| Accession [info] | PS00089 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00084 |
Name and characterization of the entry
| Description [info] | Ribonucleotide reductase large subunit signature. |
| Pattern [info] |
W-x(2)-[LIVF]-x(6,7)-G-[LIVM]-[FYRA]-[NH]-x(3)-[STAQLIVM]-[ASC]-x(2)- [PA]. |
Numerical results [info]
| Total number of hits | 91 in 91 different sequences |
| Number of true positive hits | 77 in 77 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 14 in 14 different sequences |
| Number of false negative sequences | 5 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 84.62 % |
| Recall (true positives / (true positives + false negatives)) | 93.90 % |
Comments [info]
| Taxonomic range [info] | Bacteriophages, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
77 sequences
NRDEB_BACSU (O31875), NRDEB_BPSPB (O64173), RIR1A_MYCS2 (P0CG99),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
5 sequences
RIR1_EHV2 (Q66663), RIR1_IIV6 (O55716), RIR1_MIMIV (Q7T6Y8),» more |
| UniProtKB/Swiss-Prot False positive sequences |
14 sequences
AMT1_METJA (Q60366), NQRB_HAEDU (Q7VNU8), NQRB_NEIMA (Q9JVP9),» more |
| PDB [Detailed view] |
81 PDB
1PEM; 1PEO; 1PEQ; 1PEU; 1R1R; 1RLR; 1ZYZ; 1ZZD; 2BQ1; 2CVS; 2CVT; 2CVU; » more |