PROSITE entry PS00074
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General information about the entry
Entry name [info] | GLFV_DEHYDROGENASE |
Accession [info] | PS00074 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-NOV-1997 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00071 |
Associated ProRule [info] | PRU10011 |
Name and characterization of the entry
Description [info] | Glu / Leu / Phe / Val dehydrogenases active site. |
Pattern [info] |
[LIV]-x(2)-G-G-[SAG]-K-x-[GV]-x(3)-[DNST]-[PL]. |
Numerical results [info]
Total number of hits | 111 in 111 different sequences |
Number of true positive hits | 108 in 108 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 14 |
Number of 'partial' sequences | 3 |
Precision (true positives / (true positives + false positives)) | 97.30 % |
Recall (true positives / (true positives + false negatives)) | 88.52 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | active_site at position 6 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
108 sequences
DHE1_ARATH (Q43314), DHE1_ORYSI (A2XMV1), DHE1_ORYSJ (Q852M0), DHE2_ARATH (Q38946), DHE2_BACFR (P94316), DHE2_BACSU (P39633), DHE2_CLODI (P27346), DHE2_CLOSY (P24295), DHE2_HALSI (P29051), DHE2_NEUCR (P00365), DHE2_PEPAS (P28997), DHE2_PORG3 (B2RKJ1), DHE2_PORGI (P0C934), DHE2_SACS2 (P80053), DHE2_STAAC (Q5HHC7), DHE2_STAAM (Q99VD0), DHE2_STAAN (Q7A6H8), DHE2_STAAR (Q6GID0), DHE2_STAAS (Q6GAW8), DHE2_STAAW (Q7A1B9), DHE2_YEAST (P33327), DHE3_AERPE (Q9YC65), DHE3_ARATH (Q9S7A0), DHE3_BACTN (P94598), DHE3_BOVIN (P00366), DHE3_CHICK (P00368), DHE3_DICDI (Q54KB7), DHE3_DROME (P54385), DHE3_HUMAN (P00367), DHE3_MAIZE (Q43260), DHE3_MOUSE (P26443), DHE3_ORYSJ (Q6H3Y7), DHE3_PIG(P42174), DHE3_PYRAB (Q47950), DHE3_PYREN (Q47951), DHE3_PYRFU (P80319), DHE3_PYRHO (P0CL73), DHE3_PYRHR (P0CL72), DHE3_RAT(P10860), DHE3_SOLLC (P93541), DHE3_THEKO (O59650), DHE3_THELN (Q56304), DHE3_THEMA (P96110), DHE3_THEPR (O74024), DHE3_VITVI (P52596), DHE4_AGABI (P54387), DHE4_BOTFU (O93934), DHE4_CHLSO (P28998), DHE4_COREF (Q8RQP4), DHE4_CORGL (P31026), DHE4_ECOLI (P00370), DHE4_EMENI (P18819), DHE4_GIAIN (P28724), DHE4_GIBFU (Q96VJ7), DHE4_GORGO (Q64I01), DHE4_HAEIN (P43793), DHE4_HALSA (Q9HRM7), DHE4_HALSI (Q5MBG2), DHE4_HEBCY (Q96UJ9), DHE4_HELPJ (Q9ZKD8), DHE4_HELPY (P55990), DHE4_HUMAN (P49448), DHE4_HYLLA (Q64HZ9), DHE4_LACBS (P54388), DHE4_NEUCR (P00369), DHE4_NEUIN (Q9HGU4), DHE4_NEUSI (Q9HGU3), DHE4_PANTR (Q64HZ8), DHE4_PENCH (Q9URS1), DHE4_PONPY (Q64I00), DHE4_PRERU (P95544), DHE4_PSYT1 (Q9S1F9), DHE4_SACSH (P39475), DHE4_SACU7 (Q8TFF6), DHE4_SALTI (Q8Z6F6), DHE4_SALTY (P15111), DHE4_SCHOC (P29507), DHE4_SCHPO (P78804), DHE4_SYNY3 (P54386), DHE4_TUBBO (Q9HFR6), DHE4_UNKP (P14657), DHE4_YEAST (P07262), DHE5_YEAST (P39708), DHEB_HALSA (P0DMG4), DHEB_HALSI (P0DMG3), DHEB_NICPL (Q9LEC8), DHE_HALSA (Q9HQE1), DHE_HALSI (F2Z610), DHLE_BACCE (P0A393), DHLE_BACCR (P0A392), DHLE_BACLI (Q53560), DHLE_BACSU (P54531), DHLE_GEOSE (P13154), DHLE_THEIN (Q60030), DHPH_BACBA (Q59224), DHPH_CALTT (F5L9G2), DHPH_LYSSH (P23307), DHPH_RHOJR (Q0SG95), DHPH_SPOUR (P97014), DHPH_THEIN (P22823), GUDB_BACSU (P50735), TRPDH_NOSP7 (B2IXH4), TRPDH_NOSPU (W8CV45), VDH_STRA4 (O69056), VDH_STRAM (P42709), VDH_STRCO (Q06539), VDH_STRFR (P40176), VDH_STRVG (Q53872)» more
|
UniProtKB/Swiss-Prot False negative sequences |
14 sequences
DHE2_ACHKL (P41755), DHE2_HALED (E1V4J5), DHE2_MYCS2 (A0R1C2), DHE2_MYCTU (O53203), DHE2_ORYSI (A2XW22), DHE2_ORYSJ (Q33E23), DHE2_PSEAE (Q9HZE0), DHE2_PYRCJ (A3MUY9), DHE3_CHAAC (P82264), DHE3_SINFN (Q53199), DHE4_PYRCJ (A3MWK6), DHEA_NICPL (O04937), DHPH_RHOSO (Q59771), GLUD2_DICDI (Q54VI3)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
3 sequences
DHE2_THUTH (P20016), DHE3_ELEEL (P28270), DHE3_PYRWO (Q09115) |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
CHM4C_DANRE (Q6IQ73), IRC3_YEAST (Q06683), SEC24_DICDI (Q54U61) |
PDB [Detailed view] |
60 PDB
1AUP; 1B26; 1B3B; 1BGV; 1BVU; 1EUZ; 1GTM; 1HRD; 1HWY; 1K89; 1L1F; 1NQT; 1NR1; 1NR7; 2TMG; 2YFH; 2YFQ; 3ETD; 3ETE; 3ETG; 3JCZ; 3JD0; 3JD1; 3JD2; 3JD3; 3JD4; 3K8Z; 3K92; 3SBO; 4BHT; 5B37; 5IJZ; 5K12; 6DHD; 6DHK; 6DHL; 6DHM; 6DHN; 6DHQ; 6DQG; 6G2U; 6JN9; 6JNA; 6JNC; 6JND; 6YEH; 6YEI; 7MFT; 7UZM; 7VDA; 8EW0; 8HHO; 8HIQ; 8HIZ; 8HJ3; 8HJ9; 8KGY; 8OWM; 8OWN; 8W4J » more |