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PROSITE entry PS00067


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PURL: https://purl.expasy.org/prosite/signature/PS00067

Direct ScanProsite submission
General information about the entry

Entry name [info] 3HCDH
Accession [info] PS00067
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00065

Name and characterization of the entry

Description [info] 3-hydroxyacyl-CoA dehydrogenase signature.
Pattern [info]
[DNES]-x(2)-[GA]-F-[LIVMFYA]-x-[NT]-R-x(3)-[PA]-[LIVMFY]-[LIVMFYST]-
x(5,6)-[LIVMFYCT]-[LIVMFYEAH]-x(2)-[GVE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 221 in 221 different sequences
Number of true positive hits 220 in 220 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 19
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.55 %
Recall (true positives / (true positives + false negatives)) 92.05 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
220 sequences

AIM1_ARATH  (Q9ZPI6), CRYL1_BOVIN (Q8SPX7), CRYL1_HUMAN (Q9Y2S2), 
» more

UniProtKB/Swiss-Prot
False negative sequences
19 sequences

CRYL1_PIG   (Q8SQ26), FAD3_RICFE  (Q4UL32), FAD3_RICPR  (Q9ZCZ1), 
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

HBD_CLOPA   (P81343)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

LCYD2_ORYSJ (Q5JNT6)

		
PDB
[Detailed view]
49 PDB

1F0Y; 1F12; 1F14; 1F17; 1IL0; 1LSJ; 1LSO; 1M76; 1WDK; 1WDL; 1WDM; 1ZCJ;
» more