PROSITE entry PS00060
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS00060
Direct ScanProsite submission
General information about the entry
| Entry name [info] | ADH_IRON_2 |
| Accession [info] | PS00060 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-NOV-1995 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00059 |
Name and characterization of the entry
| Description [info] | Iron-containing alcohol dehydrogenases signature 2. |
| Pattern [info] |
[GSW]-x-[LIVTSACD]-[GH]-x(2)-[GSAE]-[GSHYQ]-x-[LIVTP]-[GAST]-[GAS]-x(3)- [LIVMT]-x-[HNS]-[GA]-x-[GTAC]. |
Numerical results [info]
| Total number of hits | 38 in 38 different sequences |
| Number of true positive hits | 35 in 35 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 3 in 3 different sequences |
| Number of false negative sequences | 36 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 92.11 % |
| Recall (true positives / (true positives + false negatives)) | 49.30 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
35 sequences
4HBDH_CLOK5 (P38945), ADH1_CLOSA (P13604), ADH2_ECOLI (P37686),» more
|
| UniProtKB/Swiss-Prot False negative sequences |
36 sequences
4HBDH_CUPNE (Q59104), ADH1_GEOTN (A4IP64), ADHA_THEET (Q9F282),» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
MACA2_RHOOP (P56870) |
| UniProtKB/Swiss-Prot False positive sequences |
3 sequences
CAP2_HUMAN (P40123), CAP2_PONAB (Q5R5X8), GIF1_ORYSJ (Q6AVI1) |
| PDB [Detailed view] |
33 PDB
1JPU; 1JQ5; 1JQA; 1KQ3; 1OJ7; 1RRM; 2BI4; 2BL4; 3BFJ; 3OWO; 3OX4; 4QGS; » more |