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| PDOC00571 |
Serine proteases, V8 family, active sites
Description:
A number of prokaryotic proteases have been shown [1,2] to be evolutionary
related; their catalytic activity is provided by a charge relay system similar
to that of the trypsin family of serine proteases but which probably evolved
by independent convergent evolution. The sequence around the residues involved
in the catalytic triad (aspartic acid, serine and histidine) are completely
different from that of the analogous residues in the trypsin serine proteases
and can be used as signatures specific to that category of proteases. The
proteases which are known to belong to this family are listed below.
- Staphylococcus aureus V8 proteinase, which preferentially cleaves peptide
bonds on the carboxyl-terminal side of aspartate and glutamate and which is
widely used in protein sequencing studies.
- Bacillus licheniformis glutamate specific endopeptidase (GSE) [3], which
like V8 cleaves on the carboxyl-terminal side of acidic residues, but with
a strong preference for glutamate.
- Bacillus subtilis extracellular "metalloprotease" (gene mpr) [4].
- Staphylococcus aureus exfoliative (or epidermolytic) toxins A (gene eta)
and B (gene etb). These toxins cause impetigous diseases commonly referred
to as staphylococcal scalded skin syndrome (SSSS) and have been shown [1]
to possess proteolytic activity.
Note:
These proteins belong to family S2B in the classification of peptidases
[5,E1].
Last update:
November 1995 / Patterns and text revised.
Technical section:
PROSITE methods (with tools and information) covered by this documentation:
| V8_HIS, PS00672; Serine proteases, V8 family, histidine active site (PATTERN) |
| Consensus pattern: |
[ST] - G - [LIVMFYW](3) - [GN] - x(2) - T - [LIVM] - x - T - x(2) - H
H is the active site residue |
| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
NONE. |
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| Matching PDB structures:
1AGJ 1DT2 1DUA 1DUE ... [ALL] |
| V8_SER, PS00673; Serine proteases, V8 family, serine active site (PATTERN) |
| Consensus pattern: |
T - x(2) - [GC] - [NQ] - S - G - S - x - [LIVM] - [FY]
The first S is the active site residue |
| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
NONE. |
|
|
|
| Matching PDB structures:
1AGJ 1DT2 1DUA 1EXF ... [ALL] |
References:
| 1 |
Authors | Dancer S.J., Garratt R., Saldanha J., Jhoti H., Evans R. |
| Title | The epidermolytic toxins are serine proteases. |
| Source | FEBS Lett. 268:129-132(1990). |
| PubMed ID | 2384148 |
| 2 |
Authors | Bailey C.J., Smith T.P. |
| Title | The reactive serine residue of epidermolytic toxin A. |
| Source | Biochem. J. 269:535-537(1990). |
| PubMed ID | 9065774 |
| 3 |
Authors | Svendsen I., Breddam K. |
| Title | Isolation and amino acid sequence of a glutamic acid specific endopeptidase from Bacillus licheniformis. |
| Source | Eur. J. Biochem. 204:165-171(1992). |
| PubMed ID | 1346764 |
| 4 |
Authors | Sloma A., Rudolph C.F., Rufo G.A. Jr., Sullivan B.J., Theriault K.A., Ally D., Pero J. |
| Title | Gene encoding a novel extracellular metalloprotease in Bacillus subtilis. |
| Source | J. Bacteriol. 172:1024-1029(1990). |
| PubMed ID | 2105291 |
| 5 |
Authors | Rawlings N.D., Barrett A.J. |
| Title | Families of serine peptidases. |
| Source | Methods Enzymol. 244:19-61(1994). |
| PubMed ID | 7845208 |
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