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PROSITE documentation PDOC00080

Copper type II, ascorbate-dependent monooxygenases signatures

Description:

Copper type II, ascorbate-dependent monooxygenases [1] are a class of enzymes that requires copper as a cofactor and which uses ascorbate as an electron donor. The enzymes which belong to this category are:

There are a few regions of sequence similarities between these two enzymes, two of these regions contain clusters of conserved histidine residues which are most probably involved in binding copper. We selected these two regions as signature patterns.

Last update:

May 2004 / Text revised.

Technical section:

PROSITE methods (with tools and information) covered by this documentation:

CU2_MONOOXYGENASE_1, PS00084Copper type II, ascorbate-dependent monooxygenases signature 1  (PATTERN)
Consensus pattern: H - H - M - x(2) - F - x - C
The 2 H's are copper ligands
Sequences known to belong to this class detected by the pattern: ALL
Other sequence(s) detected in Swiss-Prot: NONE.
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00084
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00084
Scan Swiss-Prot/TrEMBL entries against PS00084
view ligand binding statistics
Matching PDB structures: 1OPM 1PHM 1SDW 1YI9 ... [ALL]
CU2_MONOOXYGENASE_2, PS00085Copper type II, ascorbate-dependent monooxygenases signature 2  (PATTERN)
Consensus pattern: H - x - F - x(4) - H - T - H - x(2) - G
The 3 H's are copper ligands
Sequences known to belong to this class detected by the pattern: ALL
Other sequence(s) detected in Swiss-Prot: NONE.
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00085
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00085
Scan Swiss-Prot/TrEMBL entries against PS00085
view ligand binding statistics
Matching PDB structures: 1OPM 1PHM 1SDW 1YI9 ... [ALL]

References:

1 AuthorsSouthan C., Kruse L.I.
TitleSequence similarity between dopamine beta-hydroxylase and peptide alpha-amidating enzyme: evidence for a conserved catalytic domain.
SourceFEBS Lett. 255:116-120(1989).
PubMed ID2792366
2 AuthorsStewart L.C., Klinman J.P.
TitleDopamine beta-hydroxylase of adrenal chromaffin granules: structure and function.
SourceAnnu. Rev. Biochem. 57:551-592(1988).
PubMed ID3052283
DOI10.1146/annurev.bi.57.070188.003003

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