ScanProsite tool

Output format: Text

Hits for all PROSITE (release 2024_02) motifs on sequence USERSEQ1 :

found: 1 hit in 1 sequence

Graphical view (graphical view with feature detection)
shaded alignment of hits

Hits for S4 RNA-binding domain profile:
   >PS50889|S4 (profile) S4 RNA-binding domain profile:

>USERSEQ1  (427 aa)
HTPEEALALLKRGAEEIVPEEELLAKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFTGMIGD
PSGRSKTRPPLTLEETRENAKTYVAQAGKILRQEPHLFELRYNSEWLEGLTFKEVVRLTSLMTVAQMLEREDFKKRYEAG
IPISLHELLYPFAQAYDSVAIRADVEMGGTDQRFNLLVGREVQRAYGQSPQVCFLMPLLVGLDGREKMSKSLDNYIGLTE
PPEAMFKKLMRVPDPLLPSYFRLLTDLEEEEIEALLKAGPVPAHRVLARLLTAAYALPQIPPRIDRAFYESLGYAWEAFG
RDKEAGPEEVRRAEARYDEVAKGGIPEEIPEVTIPASELKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTD
PMLQVDLSRPRILQRGKDRFVRVRLSD
      364 - 425:      score=10.003
        IWVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTDPMLQVDlSRPRILQRGKDRFVRV
        rL