ScanProsite tool

Output format: Text

Hits for all PROSITE (release 2024_02) motifs on sequence USERSEQ1 :

found: 1 hit in 1 sequence

Graphical view (graphical view with feature detection)
shaded alignment of hits

Hits for Aminoacyl-transfer RNA synthetases class-II family profile:
   >PS50862|AA_TRNA_LIGASE_II (profile) Aminoacyl-transfer RNA synthetases class-II family profile:

>USERSEQ1  (490 aa)
EDTAKDNYGKLPLIQSRDSDRTGQKRVKFVDLDEAKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEG
TISKNMVKWAGSLNLESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAAGLPVVN
LDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTYFKGKAYLAQSPQFNKQ
QLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVRKQYPVE
EFKLPKDGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKYDTDFYILDKFPLEIRPFYTMPDPANPKYS
NSYDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASL
FPRDPKRLRP
      181 - 482:      score=22.080
        ------------------------------FRIQAGVCELFREYLATKKFTEVHTPKLLG
        A--------PSEGGSSVFEVTY--FKGKAYLAQSPQFNKQQL------IVADFERVYEIG
        PVFRAEN-SNTHRHMTEFTGLDMEMAF----EEHYHEVLDTLSELFVFiFSelpkrfahE
        IELVRKQYPveefklpkdgkmvrltykegiemlraagkeigdfedlstenekflgklvrd
        kydtdfyildkfpLEIRPFYTMPdpanpkysnSYDFFMR-----GEEILSGAQRIHDHAl
        lqERMKahglspedpgLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFP